Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PAAD rs67941002 chr2:179043786 T/C 1.18E-9 177 15.72 13.53 2.2 KM Plot
PAAD rs6795201 chr3:39058339 C/T 0.000149 178 15.27 16.37 7.47 KM Plot
PAAD rs67989702 chr15:31867290 G/A 1.47E-9 173 15.53 13.47 2.2 KM Plot
PAAD rs6812659 chr4:4405126 A/G 0.000114 172 7.67 13.73 16.07 KM Plot
PAAD rs681566 chr11:74700896 A/G 8.02E-5 172 4.27 14.18 15.77 KM Plot
PAAD rs68190218 chr2:70412536 G/A 0 175 15.37 18.43 1.03 KM Plot
PAAD rs6819594 chr4:78462239 C/A 2.62E-5 177 15.55 14.63 3.9 KM Plot
PAAD rs6873486 chr5:72645773 G/A 1.56E-9 176 15.57 14.23 2.2 KM Plot
PAAD rs6887847 chr5:127473807 A/G 0.000152 178 16.17 13.95 7.87 KM Plot
PAAD rs6902305 chr6:36259974 A/G 0 177 0.4 15.67 15.43 KM Plot
PAAD rs6910301 chr6:41246166 G/A 0.000118 177 15.77 13.87 3.43 KM Plot
PAAD rs6910438 chr6:41246174 G/A 0.000118 177 15.77 13.87 3.43 KM Plot
PAAD rs6910730 chr6:41246633 A/G 6.17E-5 175 15.77 14.33 3.43 KM Plot
PAAD rs6910749 chr6:44773892 A/G 6.88E-5 175 16.48 16.13 12.42 KM Plot
PAAD rs6934594 chr6:45319876 A/G 0.000103 178 15.48 16.15 13.5 KM Plot